Gene: AT3G19580 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G19580
Transcript Identifier
AT3G19580.1
Gene Type
Coding gene
Location
Chr3 : 6803293-6804114 : negative

Family

Gene family
HOM04M000212
(444 genes in 26 species)
specific family
Subfamily
ORTHO04M000724
(153 genes in 23 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
zinc-finger protein 2
Curated Summary
Encodes zinc finger protein. mRNA levels are upregulated in response to ABA, high salt, and mild dessication. The protein is localized to the nucleus and acts as a transcriptional repressor.
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Identifiers

Type Value
AliasAZF2,zinc-finger protein 2
symbolZF2
tidAT3G19580.1
UniProtQ9SSW2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0009738 IEAUniProtabscisic acid-activated signaling pathway1
GO:0009414 IEPUniProtresponse to water deprivation1
GO:0009737 IMP, IEPUniProtresponse to abscisic acid1 2
GO:0009793 IEPUniProtembryo development ending in seed dormancy1
GO:0042538 IEPUniProthyperosmotic salinity response1
GO:0045892 IDAUniProtnegative regulation of transcription, DNA-templated1
GO:0010200 IEPUniProtresponse to chitin1
GO:0010117 IEAPLAZA Tree-based OrthologyphotoprotectionAT1G27730
GO:0015979 IEAPLAZA Tree-based OrthologyphotosynthesisAT1G27730
GO:0071289 IEAPLAZA Tree-based Orthologycellular response to nickel ionAT2G37430
GO:0048235 IEAPLAZA Tree-based Orthologypollen sperm cell differentiationAT4G35280
GO:0006979 IEAPLAZA Tree-based Orthologyresponse to oxidative stressAT1G27730
GO:0009409 IEAPLAZA Tree-based Orthologyresponse to coldAT1G27730
GO:0009555 IEAPLAZA Tree-based Orthologypollen developmentAT3G10470
GO:0006355 IEAPLAZA Tree-based Orthologyregulation of transcription, DNA-templatedAT4G35280
GO:0009644 IEAPLAZA Tree-based Orthologyresponse to high light intensityAT1G27730
GO:0009611 IEAPLAZA Tree-based Orthologyresponse to woundingAT1G27730
GO:0009651 IEAPLAZA Tree-based Orthologyresponse to salt stressAT1G27730
GO:0055062 IEAPLAZA Tree-based Orthologyphosphate ion homeostasisAT5G04340
GO:2000280 IEAPLAZA Tree-based Orthologyregulation of root developmentAT5G04340
GO:0035264 IEAPLAZA Tree-based Orthologymulticellular organism growthAT1G27730

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 ISS, IEAGene Ontologynucleic acid binding1
GO:0008270 ISSGene Ontologyzinc ion binding1
GO:0046872 IEAUniProtmetal ion binding1
GO:0003677 ISSUniProtDNA binding1
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1
GO:0043565 IDAUniProtsequence-specific DNA binding1
GO:0044212 IPIUniProttranscription regulatory region DNA binding1 2
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT5G43170
GO:0001047 IEAPLAZA Tree-based Orthologycore promoter bindingAT5G04340

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, ISMISS, UniProtnucleus1 2 3

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013087Zinc finger C2H2-type

Mapman id Description
15.5.15.RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)
No SignalP domains detected for this gene.