Gene: AT3G16500 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G16500
Transcript Identifier
AT3G16500.1
Gene Type
Coding gene
Location
Chr3 : 5612801-5614208 : negative

Family

Gene family
HOM04M000122
(709 genes in 27 species)
specific family
Subfamily
ORTHO04M000070
(641 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
phytochrome-associated protein 1
Curated Summary
phytochrome-associated protein 1 (PAP1)
Show more...

Identifiers

Type Value
AliasIAA26,indole-3-acetic acid inducible 26
symbolPAP1
tidAT3G16500.1
UniProtQ8LAL2

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAUniProtregulation of transcription, DNA-templated1
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0009734 IEAUniProtauxin-activated signaling pathway1
GO:0009733 IEP, TAS, UniProtresponse to auxin1
GO:0010205 IMPUniProtphotoinhibition
GO:0009737 IEPUniProtresponse to abscisic acid
GO:0009409 IEPUniProtresponse to cold
GO:0016036 IEPUniProtcellular response to phosphate starvation
GO:0009718 IMPUniProtanthocyanin-containing compound biosynthetic process
GO:0030154 IBAUniProtcell differentiation
GO:0050832 IEPUniProtdefense response to fungus
GO:0009867 IMPUniProtjasmonic acid mediated signaling pathway
GO:0031542 IMPUniProtpositive regulation of anthocyanin biosynthetic process
GO:0031540 IMPUniProtregulation of anthocyanin biosynthetic process
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter
GO:0019430 IMPUniProtremoval of superoxide radicals
GO:0009723 IEPUniProtresponse to ethylene
GO:0009753 IEPUniProtresponse to jasmonic acid
GO:0009651 IEPUniProtresponse to salt stress
GO:0009745 IMPUniProtsucrose mediated signaling
GO:0009626 IEAUniProtplant-type hypersensitive response
GO:0010224 IEPUniProtresponse to UV-B
GO:0010102 IEAPLAZA Integrative Orthologylateral root morphogenesisAT5G25890
GO:0010200 IEAPLAZA Tree-based Orthologyresponse to chitinAT1G04100
GO:0010588 IEAPLAZA Tree-based Orthologycotyledon vascular tissue pattern formationAT2G46990
GO:0010600 IEAPLAZA Tree-based Orthologyregulation of auxin biosynthetic processSolyc09g090910.1
GO:0045040 IEAPLAZA Tree-based Orthologyprotein import into mitochondrial outer membraneAT4G29080
GO:0006109 IEAPLAZA Tree-based Orthologyregulation of carbohydrate metabolic processAT4G29080
GO:0006626 IEAPLAZA Tree-based Orthologyprotein targeting to mitochondrionAT4G29080
GO:0060777 IEAPLAZA Tree-based Orthologycompound leaf morphogenesisSolyc04g076850.2
GO:0006950 IEAPLAZA Tree-based Orthologyresponse to stressSolyc04g076850.2
GO:0009647 IEAPLAZA Tree-based OrthologyskotomorphogenesisAT2G46990
GO:0080167 IEAPLAZA Tree-based Orthologyresponse to karrikinAT4G29080
GO:1901332 IEAPLAZA Tree-based Orthologynegative regulation of lateral root developmentAT2G22670
GO:0010051 IEAPLAZA Tree-based Orthologyxylem and phloem pattern formationAT1G04550
GO:0009880 IEAPLAZA Tree-based Orthologyembryonic pattern specificationAT1G04550
GO:0080086 IEAPLAZA Tree-based Orthologystamen filament developmentAT3G15540
GO:0010252 IEAPLAZA Tree-based Orthologyauxin homeostasisSolyc12g096980.1
GO:0010154 IEAPLAZA Tree-based Orthologyfruit developmentSolyc04g076850.2
GO:0010311 IEAPLAZA Tree-based Orthologylateral root formationAT2G22670
GO:0010114 IEAPLAZA Tree-based Orthologyresponse to red lightAT4G32280
GO:0010930 IEAPLAZA Tree-based Orthologynegative regulation of auxin mediated signaling pathwaySolyc04g076850.2
GO:0010218 IEAPLAZA Tree-based Orthologyresponse to far red lightAT4G32280
GO:0048367 IEAPLAZA Tree-based Orthologyshoot system developmentAT3G17600
GO:0045892 IEAPLAZA Tree-based Orthologynegative regulation of transcription, DNA-templatedAT1G04550
GO:0009704 IEAPLAZA Tree-based Orthologyde-etiolationAT1G52830
GO:0009628 IEAPLAZA Tree-based Orthologyresponse to abiotic stimulusSolyc03g121060.2
GO:0009408 IEAPLAZA Tree-based Orthologyresponse to heatSolyc12g096980.1
GO:0048364 IEAPLAZA Tree-based Orthologyroot developmentAT3G62100
GO:0009414 IEAPLAZA Tree-based Orthologyresponse to water deprivationSolyc03g121060.2
GO:0009630 IEAPLAZA Tree-based OrthologygravitropismAT3G62100
GO:0009555 IEAPLAZA Tree-based Orthologypollen developmentAT2G01200
GO:1900057 IEAPLAZA Tree-based Orthologypositive regulation of leaf senescenceAT1G04250
GO:0009611 IEAPLAZA Tree-based Orthologyresponse to woundingAT3G23050
GO:0009791 IEAPLAZA Tree-based Orthologypost-embryonic developmentSolyc09g065850.2
GO:0009793 IEAPLAZA Tree-based Orthologyembryo development ending in seed dormancyAT2G01200
GO:1902074 IEAPLAZA Tree-based Orthologyresponse to saltSolyc03g121060.2
GO:0010262 IEAPLAZA Tree-based Orthologysomatic embryogenesisAT3G62100

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1
GO:0003993 IEA, IMPUniProtacid phosphatase activity
GO:0046872 IEAUniProtmetal ion binding
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0043565 IBAUniProtsequence-specific DNA binding
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0044212 IBAUniProttranscription regulatory region DNA binding
GO:0008195 IDAUniProtphosphatidate phosphatase activity
GO:0042802 IEAPLAZA Tree-based Orthologyidentical protein bindingAT1G04250
GO:0030943 IEAPLAZA Tree-based Orthologymitochondrion targeting sequence bindingAT4G29080

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBA, IDA, IEA, UniProtnucleus1
GO:0016021 IEAUniProtintegral component of membrane
GO:0009507 IDAUniProtchloroplast
GO:0009570 IDAUniProtchloroplast stroma
GO:0009534 IDAUniProtchloroplast thylakoid
GO:0009535 IDAUniProtchloroplast thylakoid membrane
GO:0010287 IDAUniProtplastoglobule
GO:0010319 IDAUniProtstromule
GO:0009579 IDAUniProtthylakoid
GO:0031977 IDAUniProtthylakoid lumen
GO:0005829 IDAUniProtcytosol
GO:0005576 IEAUniProtextracellular region
GO:0009505 IDAUniProtplant-type cell wall
GO:0005887 TASUniProtintegral component of plasma membrane
GO:0005886 IDAUniProtplasma membrane
GO:0005739 IEAPLAZA Tree-based OrthologymitochondrionAT4G29080
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmAT2G22670
GO:0005740 IEAPLAZA Tree-based Orthologymitochondrial envelopeAT4G29080
GO:0009941 IEAPLAZA Tree-based Orthologychloroplast envelopeAT4G29080
GO:0005768 IEAPLAZA Tree-based OrthologyendosomeAT4G29080
GO:0009506 IEAPLAZA Tree-based OrthologyplasmodesmaAT4G28640
GO:0005802 IEAPLAZA Tree-based Orthologytrans-Golgi networkAT4G29080
GO:0005794 IEAPLAZA Tree-based OrthologyGolgi apparatusAT4G29080

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003311AUX/IAA protein
IPR033389AUX/IAA domain
IPR000270PB1 domain

Mapman id Description
11.2.2.1.2.Phytohormone action.auxin.perception and signal transduction.receptor complex.repressor component Aux/IAA
No SignalP domains detected for this gene.