PLAZA 4.0 Monocots gene overview : AT3G12160

Gene: AT3G12160 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G12160
Transcript Identifier: AT3G12160.1
Gene Type: Coding gene
Location: Chr3 : 3879495-3880437 : negative

Family

Gene family: HOM04M000036
(1581 genes in 29 species)
specific family
Subfamily: ORTHO04M001801
(84 genes in 27 species)
specific family

Descriptions

Description: RAB GTPase homolog A4D

Curated Summary: Encodes RABA4D, a member of the Arabidopsis RabA4 subfamily of Rab GTPase proteins. It is transported in exocytic vesicles to the apical tip of pollen tubes where it appears to promote tip growth. Proper localization of RabA4d depends on ROP1, RIC3, and RIC4 activity.

Identifiers

Type	Value
Alias	ATRABA4D,ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG A4D
symbol	RABA4D
tid	AT3G12160.1
UniProt	Q9LH50

Toolbox

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0015031	IEA	UniProt	protein transport	1
GO:0009860	IDA	UniProt	pollen tube growth	1
GO:0048868	IGI	UniProt	pollen tube development	1
GO:0080092	IMP	UniProt	regulation of pollen tube growth	1

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003924	IEA	UniProt	GTPase activity	1
GO:0005525	IEA, ISS,	UniProt	GTP binding	1 2
GO:0019900	IPI	UniProt	kinase binding	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005768	IBA	UniProt	endosome	1
GO:0005794	IBA, ISM,	UniProt	Golgi apparatus	1 2
GO:0030659	IEA	UniProt	cytoplasmic vesicle membrane	1
GO:0045177	IDA	UniProt	apical part of cell	1
GO:0070382	IDA	UniProt	exocytic vesicle	1
GO:0090404	IDA	UniProt	pollen tube tip	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001806	Small GTPase superfamily
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR005225	Small GTP-binding protein domain

Mapman id	Description
22.8.1.1	.Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase

No SignalP domains detected for this gene.