Gene: AT3G10480 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G10480
Transcript Identifier
AT3G10480.1
Gene Type
Coding gene
Location
Chr3 : 3264410-3266781 : positive

Family

Gene family
HOM04M000014
(2446 genes in 27 species)
specific family
Subfamily
ORTHO04M000022
(1115 genes in 27 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
NAC domain containing protein 50
Curated Summary
Encodes a NAC transcription factor that physically associates with the histone H3K4 demethylase JMJ14 and through that association is involved in transcriptional repression and flowering time control.
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Identifiers

Type Value
AliasANAC050,NAC domain containing protein 50
symbolNAC050
tidAT3G10480.1
UniProtQ9SQX9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAUniProtregulation of transcription, DNA-templated
GO:0007275 ISSGene Ontologymulticellular organism development1
GO:0006351 IDA, IEAUniProttranscription, DNA-templated1 2
GO:0010228 IGIUniProtvegetative to reproductive phase transition of meristem1 2
GO:0045892 IMPUniProtnegative regulation of transcription, DNA-templated1 2
GO:0016441 IEAPLAZA Integrative Orthologyposttranscriptional gene silencingAT3G10490
GO:0009555 IEAPLAZA Integrative Orthologypollen developmentAT3G10490

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAUniProtDNA binding
GO:0003700 IDA, ISS, UniProttranscription factor activity, sequence-specific DNA binding1 2 3
GO:0000976 IDAUniProttranscription regulatory region sequence-specific DNA binding1 2

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, UniProtnucleus1
GO:0016021 IEAUniProtintegral component of membrane
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT3G10490

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003441NAC domain

Mapman id Description
15.5.17.RNA biosynthesis.transcriptional regulation.transcription factor (NAC)
No SignalP domains detected for this gene.