Gene: AT3G10230 (Arabidopsis thaliana)

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Gene Identifier
AT3G10230
Transcript Identifier
AT3G10230.1
Gene Type
Coding gene
Location
Chr3 : 3164340-3165845 : negative

Family

Gene family
HOM04M001947
(79 genes in 28 species)
specific family
Subfamily
ORTHO04M005105
(42 genes in 28 species)
specific family

Descriptions

Description
lycopene cyclase
Curated Summary
Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene.
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Identifiers

Type Value
AliasAtLCY
symbolLYC
tidAT3G10230.1
UniProtQ38933

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAGene Ontologyoxidation-reduction process1
GO:0016117 IEAUniProtcarotenoid biosynthetic process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491 IEAInterProoxidoreductase activity
GO:0016705 IEAUniProtoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1
GO:0045436 IDAUniProtlycopene beta cyclase activity1 2

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 ISMGene Ontologymitochondrion1
GO:0009507 IEA, ISM, TAS, UniProtchloroplast1 2 3

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023753FAD/NAD(P)-binding domain
IPR010108Lycopene cyclase, beta/epsilon

Mapman id Description
9.1.6.1.6.Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.lycopene beta cyclase (LCY-b)
No SignalP domains detected for this gene.