Gene: AT3G05090 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G05090
Transcript Identifier
AT3G05090.2
Gene Type
Coding gene
Location
Chr3 : 1418573-1422723 : negative

Family

Gene family
HOM04M003417
(50 genes in 29 species)
specific family

Descriptions

Description
Transducin/WD40 repeat-like superfamily protein
Curated Summary
Encodes a DCAF protein. Mutants are defective in lateral root development and suggest roles for DDB1­Cul4–mediated protein degradation in regulating auxin accumulation during lateral root primordium development and lateral root meristem emergence.
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Identifiers

Type Value
full_nameLATERAL ROOT STIMULATOR 1
symbolLRS1
tidAT3G05090.2
UniProtQ93ZS6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010311 IMPUniProtlateral root formation1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0000166 ISSGene Ontologynucleotide binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISMGene Ontologynucleus1
GO:0080008 ISSUniProtCul4-RING E3 ubiquitin ligase complex1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011042Six-bladed beta-propeller, TolB-like
IPR001680WD40 repeat
IPR021772Protein of unknown function DUF3337
IPR020472G-protein beta WD-40 repeat
IPR019775WD40 repeat, conserved site
IPR017986WD40-repeat-containing domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.