Gene: AT2G47990 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G47990
Transcript Identifier
AT2G47990.1
Gene Type
Coding gene
Location
Chr2 : 19637010-19638602 : negative

Family

Gene family
HOM04M005964
(34 genes in 28 species)
specific family

Descriptions

Description
transducin family protein / WD-40 repeat family protein
Curated Summary
Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant.
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Identifiers

Type Value
AliasEDA13,EMBRYO SAC DEVELOPMENT ARREST 13,EDA19,EMBRYO SAC DEVELOPMENT ARREST 19
full_nameSLOW WALKER1
symbolSWA1
tidAT2G47990.1
UniProtO82266

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006364 IMP, IEA, UniProtrRNA processing1
GO:0007049 IEAUniProtcell cycle1
GO:0051301 IEAUniProtcell division1
GO:0009553 IMPUniProtembryo sac development1
GO:0009561 IMPUniProtmegagametogenesis1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0000166 ISSGene Ontologynucleotide binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005730 IDA, IEA, UniProtnucleolus1
GO:0005634 ISMGene Ontologynucleus1
GO:0080008 ISSUniProtCul4-RING E3 ubiquitin ligase complex1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR018983U3 small nucleolar RNA-associated protein 15, C-terminal
IPR001680WD40 repeat
IPR020472G-protein beta WD-40 repeat
IPR019775WD40 repeat, conserved site
IPR017986WD40-repeat-containing domain

Mapman id Description
17.1.3.2.1.2.3.Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpA module.assembly factor (SWA1)
No SignalP domains detected for this gene.