Gene: AT2G47170 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G47170
Transcript Identifier
AT2G47170.1
Gene Type
Coding gene
Location
Chr2 : 19367264-19368518 : positive

Family

Gene family
HOM04M000134
(666 genes in 29 species)
specific family
Subfamily
ORTHO04M000186
(344 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Ras-related small GTP-binding family protein
Curated Summary
Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. Members of this family are known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.
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Identifiers

Type Value
symbolARF1A1C
tidAT2G47170.1
UniProtP36397

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007264 IEAGene Ontologysmall GTPase mediated signal transduction1
GO:0015031 IEAGene Ontologyprotein transport1
GO:0016192 IEAGene Ontologyvesicle-mediated transport1
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT1G23490
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT1G23490
GO:0010150 IEAPLAZA Integrative Orthologyleaf senescenceAT1G23490
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT1G23490

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005525 ISS, TAS, IEAGene OntologyGTP binding1 2
GO:0016004 TASGene Ontologyphospholipase activator activity1
GO:0005507 IEAPLAZA Integrative Orthologycopper ion bindingAT1G10630
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G23490
GO:0042802 IEAPLAZA Integrative Orthologyidentical protein bindingAT1G23490
GO:0003677 IEAPLAZA Integrative OrthologyDNA bindingAT1G23490

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622 IEAInterProintracellular
GO:0005768 IEAGene Ontologyendosome1
GO:0005794 IDA, ISMGene OntologyGolgi apparatus1 2
GO:0005798 IDAGene OntologyGolgi-associated vesicle1 AGRICOLA_IND:IND22293523
GO:0005829 RCAGene Ontologycytosol1
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G10630
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT1G10630
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT1G70490
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT1G10630

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006689Small GTPase superfamily, ARF/SAR type
IPR024156Small GTPase superfamily, ARF type
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR005225Small GTP-binding protein domain

Mapman id Description
22.3.2.1.Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase
No SignalP domains detected for this gene.