Gene: AT2G46610 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G46610
Transcript Identifier
AT2G46610.1
Gene Type
Coding gene
Location
Chr2 : 19136769-19138492 : negative

Family

Gene family
HOM04M001025
(135 genes in 29 species)
specific family
Subfamily
ORTHO04M001689
(88 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
RNA-binding (RRM/RBD/RNP motifs) family protein
Curated Summary
Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.
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Identifiers

Type Value
AliasAt-RS31a,arginine/serine-rich splicing factor 31a
full_namearginine/serine-rich splicing factor 31a
symbolRS31a
tidAT2G46610.1
UniProtQ9ZPX8

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006397 IEAGene OntologymRNA processing1
GO:0008380 IEAGene OntologyRNA splicing1
GO:0000398 IEAPLAZA Integrative OrthologymRNA splicing, via spliceosomeAT3G61860

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0003723 IEA, ISS, UniProtRNA binding1 2
GO:0005515 IPIGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISMGene Ontologynucleus1
GO:0005681 IEAGene Ontologyspliceosomal complex1
GO:0016607 IEAGene Ontologynuclear speck1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000504RNA recognition motif domain

Mapman id Description
16.4.6.3.RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RS31|40|41)
No SignalP domains detected for this gene.