PLAZA 4.0 Monocots gene overview : AT2G45000

Gene: AT2G45000 (Arabidopsis thaliana)

Overview

Gene Identifier: AT2G45000
Transcript Identifier: AT2G45000.1
Gene Type: Coding gene
Location: Chr2 : 18564156-18567632 : positive

Family

Gene family: HOM04M005547
(36 genes in 28 species)
specific family

Descriptions

Description: structural constituent of nuclear pore

Identifiers

Type	Value
Alias	AtNUP62,NUP62,nucleoporin 62
full_name	EMBRYO DEFECTIVE 2766
symbol	EMB2766
tid	AT2G45000.1
UniProt	Q8L7F7

Toolbox

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006405	IBA	Gene Ontology	RNA export from nucleus	1
GO:0006606	IBA	UniProt	protein import into nucleus	1
GO:0051028	IEA	UniProt	mRNA transport	1
GO:0071426	IBA	UniProt	ribonucleoprotein complex export from nucleus	1
GO:0010930	IGI	UniProt	negative regulation of auxin mediated signaling pathway	1 2

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0017056	IBA, IEA,	UniProt	structural constituent of nuclear pore	1
GO:0005487	IBA	UniProt	nucleocytoplasmic transporter activity	1
GO:0005543	IBA	UniProt	phospholipid binding	1
GO:0005515	IPI	Gene Ontology	protein binding	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005643	IEA	InterPro	nuclear pore
GO:0044613	IBA	UniProt	nuclear pore central transport channel	1
GO:0005829	IDA	UniProt	cytosol	1
GO:0005635	IDA	UniProt	nuclear envelope	1
GO:0034399	IDA	UniProt	nuclear periphery	1 2

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR026010	Nucleoporin NSP1/NUP62
IPR007758	Nucleoporin, NSP1-like, C-terminal

Mapman id	Description
23.5.1.1.6.2	.Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.nucleoporin (NUP62)

No SignalP domains detected for this gene.