Gene: AT2G41850 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G41850
Transcript Identifier
AT2G41850.1
Gene Type
Coding gene
Location
Chr2 : 17461918-17464059 : negative

Family

Gene family
HOM04M000090
(926 genes in 27 species)
specific family
Subfamily
ORTHO04M000273
(289 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
polygalacturonase ADPG2-like protein
Curated Summary
ADPG2.
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Identifiers

Type Value
AliasADPG2,ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2
full_namepolygalacturonase abscission zone A. thaliana
symbolPGAZAT
tidAT2G41850.1
UniProtQ8RY29

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975 IEA, ISS, UniProtcarbohydrate metabolic process1 2
GO:0009830 TASUniProtcell wall modification involved in abscission1
GO:0009901 IMPUniProtanther dehiscence1
GO:0010047 IMPUniProtfruit dehiscence1
GO:0010227 IMPUniProtfloral organ abscission1
GO:0048235 IEAPLAZA Tree-based Orthologypollen sperm cell differentiationAT3G07970
GO:0045490 IEAPLAZA Tree-based Orthologypectin catabolic processAT3G07970

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004650 IDA, ISS, IEA, UniProtpolygalacturonase activity1 2

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576 IEA, ISM, UniProtextracellular region1 2
GO:0005618 IEAUniProtcell wall1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012334Pectin lyase fold
IPR000743Glycoside hydrolase, family 28
IPR006626Parallel beta-helix repeat
IPR011050Pectin lyase fold/virulence factor

Mapman id Description
21.3.5.1.1.Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (QRT2)
No SignalP domains detected for this gene.