PLAZA 4.0 Monocots gene overview : AT2G41270

Gene: AT2G41270 (Arabidopsis thaliana)

Overview

Gene Identifier: AT2G41270
Transcript Identifier: AT2G41270.1
Gene Type: Pseudo gene
Location: Chr2 : 17208545-17209402 : negative

Family

No gene family defined for this gene.

Descriptions

Description: pseudogene
pseudogene of strictosidine synthase-like 2

Identifiers

Type	Value
tid	AT2G41270.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Browse

...the gene in IGV.js, a genome browser

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

No InterPro domains detected for this gene.

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.