PLAZA 4.0 Monocots gene overview : AT2G40740

Gene: AT2G40740 (Arabidopsis thaliana)

Overview

Gene Identifier: AT2G40740
Transcript Identifier: AT2G40740.3
Gene Type: Coding gene
Location: Chr2 : 16997150-16999276 : positive

Family

Gene family: HOM04M000167
(542 genes in 26 species)
specific family
Subfamily: ORTHO04M000212
(324 genes in 26 species)
specific family
Duplication type: Tandem duplicate and Block duplicate

Descriptions

Description: WRKY DNA-binding protein 55

Curated Summary: member of WRKY Transcription Factor; Group III

Identifiers

Type	Value
Alias	ATWRKY55,WRKY DNA-BINDING PROTEIN 55
symbol	WRKY55
tid	AT2G40740.3

Toolbox

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...the colinearity of this gene with other genomes.
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...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006355	IEA, ISS	Gene Ontology	regulation of transcription, DNA-templated	1 2
GO:0006351	IEA	UniProt	transcription, DNA-templated	1

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003700	IEA, ISS,	UniProt	transcription factor activity, sequence-specific DNA binding	1 2
GO:0043565	IEA	UniProt	sequence-specific DNA binding	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IEA, ISM,	UniProt	nucleus	1 2

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR003657	WRKY domain

Mapman id	Description
15.5.22	.RNA biosynthesis.transcriptional regulation.transcription factor (WRKY)

No SignalP domains detected for this gene.