Gene: AT2G39940 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G39940
Transcript Identifier
AT2G39940.1
Gene Type
Coding gene
Location
Chr2 : 16672848-16675486 : negative

Family

Gene family
HOM04M000391
(291 genes in 27 species)
specific family
Subfamily
ORTHO04M001926
(81 genes in 27 species)
specific family

Descriptions

Description
RNI-like superfamily protein
Curated Summary
Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.
Show more...

Identifiers

Type Value
full_nameCORONATINE INSENSITIVE 1
symbolCOI1
tidAT2G39940.1
UniProtO04197

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567 IEAUniProtprotein ubiquitination1
GO:0006511 TASGene Ontologyubiquitin-dependent protein catabolic process1
GO:0009861 TASUniProtjasmonic acid and ethylene-dependent systemic resistance1
GO:0009867 IGI, TAS, UniProtjasmonic acid mediated signaling pathway1 2
GO:0009625 IMPUniProtresponse to insect1
GO:0009611 IMPUniProtresponse to wounding1
GO:0009753 IMPUniProtresponse to jasmonic acid1
GO:0031348 IMPUniProtnegative regulation of defense response1
GO:0010118 IMPUniProtstomatal movement1
GO:0042742 IMPUniProtdefense response to bacterium1
GO:0050832 IMPUniProtdefense response to fungus1
GO:0031146 IMPUniProtSCF-dependent proteasomal ubiquitin-dependent protein catabolic process1
GO:0009641 IMPUniProtshade avoidance1
GO:0009909 IMPUniProtregulation of flower development1
GO:0010218 IMPUniProtresponse to far red light1
GO:0009901 IMPUniProtanther dehiscence1 2
GO:0048364 IMPUniProtroot development1 2
GO:0048443 IMPUniProtstamen development1 2
GO:0006952 TASUniProtdefense response1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IPIGene Ontologyprotein binding1
GO:0004842 ISSGene Ontologyubiquitin-protein transferase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISMGene Ontologynucleus1
GO:0019005 IPIGene OntologySCF ubiquitin ligase complex1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR032675Leucine-rich repeat domain, L domain-like

Mapman id Description
11.7.2.1.1.Phytohormone action.jasmonic acid.perception and signal transduction.receptor complex.component COI
No SignalP domains detected for this gene.