Gene: AT2G31450 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G31450
Transcript Identifier
AT2G31450.2
Gene Type
Coding gene
Location
Chr2 : 13401318-13404134 : negative

Family

Gene family
HOM04M005219
(37 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
DNA glycosylase superfamily protein
Show more...

Identifiers

Type Value
symbolATNTH1
tidAT2G31450.2
UniProtQ9SIC4-2

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006284 IDA, ISS, IEAGene Ontologybase-excision repair1 2 3
GO:0006281 IEAInterProDNA repair
GO:0006285 IBA, IEAGene Ontologybase-excision repair, AP site formation1
GO:0006296 IBAGene Ontologynucleotide-excision repair, DNA incision, 5'-to lesion1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003906 IDA, IEAGene OntologyDNA-(apurinic or apyrimidinic site) lyase activity1 2
GO:0019104 IDA, IEAGene OntologyDNA N-glycosylase activity1 2
GO:0003677 IEAGene OntologyDNA binding1
GO:0051539 IEAGene Ontology4 iron, 4 sulfur cluster binding1
GO:0003824 IEAInterProcatalytic activity
GO:0000703 IBAGene Ontologyoxidized pyrimidine nucleobase lesion DNA N-glycosylase activity1
GO:0046872 IEAGene Ontologymetal ion binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBA, ISM, IEAGene Ontologynucleus1 2
GO:0005739 ISMGene Ontologymitochondrion1
GO:0042644 IDAGene Ontologychloroplast nucleoid1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003265HhH-GPD domain
IPR023170Helix-turn-helix, base-excision DNA repair, C-terminal
IPR030841Endonuclease III-like protein 1
IPR000445Helix-hairpin-helix motif
IPR004035Endonuclease III, iron-sulphur binding site
IPR004036Endonuclease III-like, conserved site-2
IPR003651Endonuclease III-like, iron-sulphur cluster loop motif
IPR003583Helix-hairpin-helix DNA-binding motif, class 1
IPR011257DNA glycosylase

Mapman id Description
14.5.11.DNA damage response.base excision repair (BER).bifunctional glycosylase-lyase and endonuclease (NTH)
No SignalP domains detected for this gene.