Gene: AT2G28950 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G28950
Transcript Identifier
AT2G28950.1
Gene Type
Coding gene
Location
Chr2 : 12431840-12433482 : negative

Family

Gene family
HOM04M000098
(863 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
expansin A6
Curated Summary
Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.
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Identifiers

Type Value
AliasATEXP6,ARABIDOPSIS THALIANA TEXPANSIN 6,ATEXPA6,expansin A6,ATHEXP ALPHA 1.8
symbolEXPA6
tidAT2G28950.1
UniProtQ38865

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009664 IEAUniProtplant-type cell wall organization1
GO:0009826 ISS, NASGene Ontologyunidimensional cell growth1 2
GO:0009828 ISS, NASGene Ontologyplant-type cell wall loosening1 2
GO:0009831 ISSGene Ontologyplant-type cell wall modification involved in multidimensional cell growth1
GO:0006949 IEPUniProtsyncytium formation1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576 IEA, ISM, UniProtextracellular region1 2
GO:0016020 IEAUniProtmembrane1
GO:0009505 IDAUniProtplant-type cell wall1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007117Expansin, cellulose-binding-like domain
IPR009009RlpA-like protein, double-psi beta-barrel domain
IPR002963Expansin
IPR007118Expansin/Lol pI
IPR007112Expansin/pollen allergen, DPBB domain

Mapman id Description
21.4.2.1.Cell wall organisation.cell wall proteins.expansin activities.alpha-class expansin
No SignalP domains detected for this gene.