Gene: AT2G27350 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G27350
Transcript Identifier
AT2G27350.2
Gene Type
Coding gene
Location
Chr2 : 11699780-11702363 : negative

Family

Gene family
HOM04M004670
(40 genes in 27 species)
specific family

Descriptions

Description
OTU-like cysteine protease family protein
Curated Summary
Encodes an otubain-like histone deubiquitinase involved in chromatin modification and regulation of plant gene expression.
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Identifiers

Type Value
full_nameotubain-like deubiquitinase 1
symbolOTLD1
tidAT2G27350.2
UniProtQ9XIP2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016579 IEAUniProtprotein deubiquitination
GO:0016578 IDAUniProthistone deubiquitination1
GO:0045892 IEPUniProtnegative regulation of transcription, DNA-templated1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004843 IEAUniProtthiol-dependent ubiquitin-specific protease activity
GO:0005515 IEAInterProprotein binding
GO:0008234 ISSGene Ontologycysteine-type peptidase activity1
GO:0003682 IDAUniProtchromatin binding1
GO:0031491 IDAUniProtnucleosome binding1
GO:0042393 IDAUniProthistone binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISMGene Ontologynucleus1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR031084OTU domain-containing protein 5/Otubain-like deubiquitinase 1
IPR003323OTU domain
IPR015940Ubiquitin-associated domain
IPR009060UBA-like

Mapman id Description
19.2.3.1.2.5.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.OTU deubiquitinase activities.histone deubiquinating protease (OTLD1)
19.2.3.1.2.7.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.OTU deubiquitinase activities.deubiquitinase (OTU6-12)
No SignalP domains detected for this gene.