Gene: AT2G26130 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G26130
Transcript Identifier
AT2G26130.1
Gene Type
Coding gene
Location
Chr2 : 11127134-11128476 : positive

Family

Gene family
HOM04M000381
(299 genes in 28 species)
specific family
Subfamily
ORTHO04M002815
(63 genes in 22 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
RING/U-box protein with C6HC-type zinc finger
Curated Summary
Encodes a RING-type zinc finger ubiquitin ligase involved in seed longevity.
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Identifiers

Type Value
AliasRSL1,Ring finger of Seed Longevity 1
tidAT2G26130.1
UniProtF4ITM1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567 IDA, IEAGene Ontologyprotein ubiquitination1 2
GO:0000209 IBAGene Ontologyprotein polyubiquitination1
GO:0032436 IBAGene Ontologypositive regulation of proteasomal ubiquitin-dependent protein catabolic process1
GO:0042787 IBAGene Ontologyprotein ubiquitination involved in ubiquitin-dependent protein catabolic process1
GO:0010431 IMPGene Ontologyseed maturation1 2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0004842 IEAInterProubiquitin-protein transferase activity
GO:0031624 IBAGene Ontologyubiquitin conjugating enzyme binding1
GO:0061630 IDAGene Ontologyubiquitin protein ligase activity1 2

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000151 IBAGene Ontologyubiquitin ligase complex1
GO:0005737 IBAGene Ontologycytoplasm1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012337Ribonuclease H-like domain
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR031127E3 ubiquitin ligase RBR family
IPR002867IBR domain

Mapman id Description
19.2.2.1.5.4.4.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA)
No SignalP domains detected for this gene.