Gene: AT2G24740 (Arabidopsis thaliana)

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Gene Identifier
AT2G24740
Transcript Identifier
AT2G24740.1
Gene Type
Coding gene
Location
Chr2 : 10529690-10531957 : negative

Family

Gene family
HOM04M000221
(431 genes in 29 species)
specific family
Subfamily
ORTHO04M000195
(339 genes in 28 species)
specific family

Descriptions

Description
SET domain group 21
Curated Summary
Encodes a SU(VAR)3-9 homolog, a SET domain protein (Homology Subgroup V; Orthology Group 1). Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. This protein is a putative histone methyltransferase (predicted to methylate H3K9/20) related to the the Drosophila Su(var)3-9 and mammalian G9a proteins.
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Identifiers

Type Value
AliasSUVH8,SU(VAR)3-9 HOMOLOG 8
symbolSDG21
tidAT2G24740.1
UniProtQ9C5P0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0034968 IEAGene Ontologyhistone lysine methylation1
GO:0016571 IEAInterProhistone methylation
GO:0040029 TASUniProtregulation of gene expression, epigenetic1
GO:0008361 IMPUniProtregulation of cell size1
GO:0048366 IMPUniProtleaf development1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0042393 IEAUniProthistone binding1
GO:0005515 IEAInterProprotein binding
GO:0008270 IEAUniProtzinc ion binding1
GO:0018024 IEAUniProthistone-lysine N-methyltransferase activity1
GO:0003677 IEAUniProtDNA binding1
GO:0042054 ISSUniProthistone methyltransferase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, UniProtnucleus1 2
GO:0000775 IEAUniProtchromosome, centromeric region1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003105SRA-YDG
IPR001214SET domain
IPR007728Pre-SET domain
IPR003616Post-SET domain
IPR025794Histone H3-K9 methyltransferase, plant
IPR017956AT hook, DNA-binding motif
IPR015947PUA-like domain

Mapman id Description
12.3.3.7.Chromatin organisation.histone modifications.histone lysine methylation.class-V histone methyltransferase (Suvar)
No SignalP domains detected for this gene.