Gene: AT2G20650 (Arabidopsis thaliana)

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Gene Identifier
AT2G20650
Transcript Identifier
AT2G20650.2
Gene Type
Coding gene
Location
Chr2 : 8903954-8907017 : negative

Family

Gene family
HOM04M004618
(40 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
RING/U-box superfamily protein
Curated Summary
Encodes a putative RING E3 ubiquitin ligase based on its 84.5% amino acid identity with FLY1, which possesses this activity in vitro. It is predicted to be localized to the endomembrane system based on protein topology.
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Identifiers

Type Value
AliasFLY2,FLYING SAUCER 2
tidAT2G20650.2
UniProtQ500V2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000209 IBAGene Ontologyprotein polyubiquitination1
GO:0042787 IBAGene Ontologyprotein ubiquitination involved in ubiquitin-dependent protein catabolic process1
GO:0043161 IBAGene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0009827 ISSGene Ontologyplant-type cell wall modification1
GO:0080001 IEAPLAZA Integrative Orthologymucilage extrusion from seed coatAT4G28370
GO:0048363 IEAPLAZA Integrative Orthologymucilage pectin metabolic processAT4G28370

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270 IEA, ISSGene Ontologyzinc ion binding1 2
GO:0016874 IEAGene Ontologyligase activity1
GO:0061630 IBAGene Ontologyubiquitin protein ligase activity1
GO:0004842 ISSGene Ontologyubiquitin-protein transferase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886 ISMGene Ontologyplasma membrane1
GO:0016021 IEAGene Ontologyintegral component of membrane1
GO:0012505 IEAPLAZA Integrative Orthologyendomembrane systemAT4G28370

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.