Gene: AT2G20610 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G20610
Transcript Identifier
AT2G20610.1
Gene Type
Coding gene
Location
Chr2 : 8878150-8880298 : negative

Family

Gene family
HOM04M000763
(171 genes in 28 species)
specific family
Subfamily
ORTHO04M000738
(150 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Tyrosine transaminase family protein
Curated Summary
Confers auxin overproduction. Mutants have an over-proliferation of lateral roots. Encodes a C-S lyase involved in converting S-alkylthiohydroximate to thiohydroximate in glucosinolate biosynthesis.
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Identifiers

Type Value
AliasALF1,ABERRANT LATERAL ROOT FORMATION 1,HLS3,HOOKLESS 3,RTY1,ROOTY 1,RTY,ROOTY
full_nameSUPERROOT 1
symbolSUR1
tidAT2G20610.1
UniProtQ9SIV0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009058 IEAInterProbiosynthetic process
GO:0006520 IEAUniProtcellular amino acid metabolic process1
GO:0019761 IMPUniProtglucosinolate biosynthetic process1
GO:0001560 IMPUniProtregulation of cell growth by extracellular stimulus1
GO:0048830 TASUniProtadventitious root development1
GO:0009684 IMPUniProtindoleacetic acid biosynthetic process1
GO:0010188 IEAPLAZA Integrative Orthologyresponse to microbial phytotoxinAT4G23600
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT2G24850
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT2G24850
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT4G23600
GO:0042538 IEAPLAZA Integrative Orthologyhyperosmotic salinity responseAT4G23600

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0030170 IEAUniProtpyridoxal phosphate binding1
GO:0008483 IEA, ISS, UniProttransaminase activity1 2
GO:0016846 IDAUniProtcarbon-sulfur lyase activity1
GO:0080108 IMPUniProtS-alkylthiohydroximate lyase activity1
GO:0004069 IEAPLAZA Integrative OrthologyL-aspartate:2-oxoglutarate aminotransferase activityAT4G23600
GO:0004121 IEAPLAZA Integrative Orthologycystathionine beta-lyase activityAT4G23600
GO:0004021 IEAPLAZA Integrative OrthologyL-alanine:2-oxoglutarate aminotransferase activityAT4G23600
GO:0050362 IEAPLAZA Integrative OrthologyL-tryptophan:2-oxoglutarate aminotransferase activityAT4G23600
GO:0004838 IEAPLAZA Integrative OrthologyL-tyrosine:2-oxoglutarate aminotransferase activityAT4G23600

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 ISMGene Ontologycytoplasm1
GO:0016020 IDAUniProtmembrane1
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT4G23600
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT4G23600

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2
IPR004839Aminotransferase, class I/classII
IPR005958Tyrosine/nicotianamine aminotransferase
IPR015424Pyridoxal phosphate-dependent transferase

Mapman id Description
9.5.1.8.Secondary metabolism.glucosinolates.glucosinolate biosynthesis.S-alkyl-thiohydroximate lyase
No SignalP domains detected for this gene.