Gene: AT2G06210 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G06210
Transcript Identifier
AT2G06210.1
Gene Type
Coding gene
Location
Chr2 : 2429108-2436588 : negative

Family

Gene family
HOM04M153219
(orphan gene)
specific family

Descriptions

Description
binding protein
Curated Summary
Encodes a yeast CTR9 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast CTR9 is a component of a five-member PAF1 complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin.
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Identifiers

Type Value
AliasVIP6,VERNALIZATION INDEPENDENCE 6
full_nameEARLY FLOWERING 8
symbolELF8
tidAT2G06210.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0016570 IEAInterProhistone modification
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0009908 IEAUniProtflower development1
GO:0051569 IBAUniProtregulation of histone H3-K4 methylation1
GO:0009910 IMPUniProtnegative regulation of flower development1
GO:0045893 IMPUniProtpositive regulation of transcription, DNA-templated1
GO:0016571 IMPUniProthistone methylation1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0000993 IBAUniProtRNA polymerase II core binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, ISM, UniProtnucleus1 2
GO:0016020 IDAUniProtmembrane1
GO:0016593 IDAUniProtCdc73/Paf1 complex1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011990Tetratricopeptide-like helical domain
IPR031101RNA polymerase-associated protein Ctr9
IPR013026Tetratricopeptide repeat-containing domain
IPR019734Tetratricopeptide repeat

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.