Gene: AT2G05170 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G05170
Transcript Identifier
AT2G05170.1
Gene Type
Coding gene
Location
Chr2 : 1870020-1873278 : positive

Family

Gene family
HOM04M006206
(33 genes in 28 species)
specific family

Descriptions

Description
vacuolar protein sorting 11
Curated Summary
Homologous to yeast VPS11. Forms a complex with VCL1 and AtVPS33. Involved in vacuolar biogenesis.
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Identifiers

Type Value
AliasATVPS11,vacuolar protein sorting 11
symbolVPS11
tidAT2G05170.1
UniProtQ9SJ40

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006886 IEAUniProtintracellular protein transport1
GO:0016192 IEAInterProvesicle-mediated transport
GO:0006904 IBAUniProtvesicle docking involved in exocytosis1
GO:0007032 IBAUniProtendosome organization1
GO:0007040 IBAUniProtlysosome organization1
GO:0035542 IBAUniProtregulation of SNARE complex assembly1
GO:0007033 TASUniProtvacuole organization1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0005488 IEAInterProbinding
GO:0005215 ISSGene Ontologytransporter activity1
GO:0008270 IEAGene Ontologyzinc ion binding1
GO:0030674 IBAUniProtprotein binding, bridging1
GO:0046872 IEAUniProtmetal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISMGene Ontologynucleus1
GO:0005768 IBAUniProtendosome1
GO:0030897 IBAUniProtHOPS complex1
GO:0031902 IEAUniProtlate endosome membrane1
GO:0009705 IDAUniProtplant-type vacuole membrane1
GO:0043234 IPIUniProtprotein complex1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR015943WD40/YVTN repeat-like-containing domain
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR011990Tetratricopeptide-like helical domain
IPR016528Vacuolar protein sorting-associated protein 11
IPR024763Vacuolar protein sorting protein 11, C-terminal
IPR000547Clathrin, heavy chain/VPS, 7-fold repeat
IPR017986WD40-repeat-containing domain
IPR016024Armadillo-type fold

Mapman id Description
22.6.5.1.Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.component VPS11
No SignalP domains detected for this gene.