Gene: AT2G02980 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G02980
Transcript Identifier
AT2G02980.1
Gene Type
Coding gene
Location
Chr2 : 868468-870279 : positive

Family

Gene family
HOM04M000001
(8521 genes in 28 species)
specific family
Subfamily
ORTHO04M000001
(5133 genes in 26 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
Pentatricopeptide repeat (PPR) superfamily protein
Curated Summary
Encodes a chloroplast RNA editing factor.
Show more...

Identifiers

Type Value
full_nameORGANELLE TRANSCRIPT PROCESSING 85
symbolOTP85
tidAT2G02980.1
UniProtQ8LK93

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006397 IEAUniProtmRNA processing1
GO:0009451 IBAUniProtRNA modification1
GO:0031425 IMPUniProtchloroplast RNA processing1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0008270 IEAUniProtzinc ion binding1
GO:0003723 IBAUniProtRNA binding1
GO:0004519 IBAUniProtendonuclease activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 ISMGene Ontologymitochondrion1
GO:0009507 IDAUniProtchloroplast1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011990Tetratricopeptide-like helical domain
IPR002885Pentatricopeptide repeat
IPR032867DYW domain

Mapman id Description
16.12.5.5.12.RNA processing.organelle machinery.RNA editing.plastidial RNA editing factor activities (PPR-type).RNA editing factor (OTP85)
No SignalP domains detected for this gene.