Gene: AT1G80670 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G80670
Transcript Identifier
AT1G80670.1
Gene Type
Coding gene
Location
Chr1 : 30320809-30323543 : negative

Family

Gene family
HOM04M002879
(57 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Transducin/WD40 repeat-like superfamily protein
Curated Summary
This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase
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Identifiers

Type Value
full_nameRNA export factor 1
symbolRAE1
tidAT1G80670.1
UniProtQ38942

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0015031 IEAGene Ontologyprotein transport1
GO:0051028 IEAUniProtmRNA transport1
GO:0006606 IBAUniProtprotein import into nucleus
GO:0006405 IBAUniProtRNA export from nucleus
GO:0000972 IBAUniProttranscription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IPI, IEAGene Ontologyprotein binding1
GO:0000166 ISSGene Ontologynucleotide binding1
GO:0003723 IBAUniProtRNA binding
GO:0043130 IBAUniProtubiquitin binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005643 IBA, IEA, UniProtnuclear pore1
GO:0005737 ISMGene Ontologycytoplasm1
GO:0080008 IPIUniProtCul4-RING E3 ubiquitin ligase complex1
GO:0005829 IDAUniProtcytosol1
GO:0005635 IDAUniProtnuclear envelope1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR001680WD40 repeat
IPR020472G-protein beta WD-40 repeat
IPR017986WD40-repeat-containing domain

Mapman id Description
23.5.1.1.1.10.Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (RAE1)
No SignalP domains detected for this gene.