Gene: AT1G80560 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G80560
Transcript Identifier
AT1G80560.1
Gene Type
Coding gene
Location
Chr1 : 30287833-30290126 : positive

Family

Gene family
HOM04M004084
(44 genes in 27 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
isopropylmalate dehydrogenase 2
Curated Summary
The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.
Show more...

Identifiers

Type Value
AliasATIMD2,ARABIDOPSIS ISOPROPYLMALATE DEHYDROGENASE 2
symbolIMD2
tidAT1G80560.1
UniProtP93832

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009098 IEA, IGI, ISSGene Ontologyleucine biosynthetic process1 2 3
GO:0055114 IEAGene Ontologyoxidation-reduction process1
GO:0019761 IEAPLAZA Integrative Orthologyglucosinolate biosynthetic processAT5G14200
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT5G14200

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003862 IEA, IGI, ISSGene Ontology3-isopropylmalate dehydrogenase activity1 2 3
GO:0016616 IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0000287 IEAGene Ontologymagnesium ion binding1
GO:0051287 IEAGene OntologyNAD binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAInterProcytoplasm
GO:0005829 IBAGene Ontologycytosol1
GO:0009507 IDA, ISMGene Ontologychloroplast1 2
GO:0009941 IDAGene Ontologychloroplast envelope1
GO:0009536 ISSGene Ontologyplastid1
GO:0009570 IDAGene Ontologychloroplast stroma1
GO:0009579 IEAPLAZA Integrative OrthologythylakoidAT1G31180

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004429Isopropylmalate dehydrogenase
IPR024084Isopropylmalate dehydrogenase-like domain
IPR019818Isocitrate/isopropylmalate dehydrogenase, conserved site

Mapman id Description
4.1.3.2.5.3.Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.3-isopropylmalate dehydrogenase
9.5.1.4.Secondary metabolism.glucosinolates.glucosinolate biosynthesis.methylthioalkylmalate dehydrogenase
No SignalP domains detected for this gene.