Gene: AT1G80170 (Arabidopsis thaliana)

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Gene Identifier
AT1G80170
Transcript Identifier
AT1G80170.1
Gene Type
Coding gene
Location
Chr1 : 30153646-30155683 : negative

Family

Gene family
HOM04M000090
(926 genes in 27 species)
specific family
Subfamily
ORTHO04M000273
(289 genes in 27 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
Pectin lyase-like superfamily protein
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Identifiers

Type Value
tidAT1G80170.1
UniProtQ94AJ5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975 IEAGene Ontologycarbohydrate metabolic process1
GO:0071555 IEAGene Ontologycell wall organization1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004650 IEA, ISSGene Ontologypolygalacturonase activity1 2
GO:0005515 IPIGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576 IEAGene Ontologyextracellular region1
GO:0009505 IDAGene Ontologyplant-type cell wall1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR012334Pectin lyase fold
IPR000743Glycoside hydrolase, family 28
IPR006626Parallel beta-helix repeat
IPR011050Pectin lyase fold/virulence factor

Mapman id Description
50.3.2.Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase
No SignalP domains detected for this gene.