PLAZA 4.0 Monocots gene overview : AT1G80090

Gene: AT1G80090 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G80090
Transcript Identifier: AT1G80090.1
Gene Type: Coding gene
Location: Chr1 : 30130218-30131855 : positive

Family

Gene family: HOM04M006816
(30 genes in 25 species)
specific family
Duplication type: Block duplicate

Descriptions

Description: Cystathionine beta-synthase (CBS) family protein

Identifiers

Type	Value
full_name	CBS domain containing protein 4
symbol	CBSX4
tid	AT1G80090.1
UniProt	Q8GXI9

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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View

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0003006	IMP	Gene Ontology	developmental process involved in reproduction	1
GO:0009555	IMP	Gene Ontology	pollen development	1
GO:0010183	IMP	Gene Ontology	pollen tube guidance	1
GO:0009553	IMP	UniProt	embryo sac development
GO:0048443	IMP	UniProt	stamen development
GO:0010476	IEA	PLAZA Tree-based Orthology	gibberellin mediated signaling pathway	Solyc06g068160.2
GO:0009738	IEA	PLAZA Tree-based Orthology	abscisic acid-activated signaling pathway	Solyc06g068160.2

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003674	ND	Gene Ontology	molecular_function	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005794	ISM	Gene Ontology	Golgi apparatus	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR000644	CBS domain

Mapman id	Description
35.1	not assigned.annotated

No SignalP domains detected for this gene.