Gene: AT1G79580 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G79580
Transcript Identifier
AT1G79580.3
Gene Type
Coding gene
Location
Chr1 : 29941020-29942925 : negative

Family

Gene family
HOM04M000014
(2446 genes in 27 species)
specific family
Subfamily
ORTHO04M000022
(1115 genes in 27 species)
specific family

Descriptions

Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Curated Summary
NAC-domain protein. Involved in root cap development. Involved in a regulatory feedback loop with FEZ. FEZ activates SMB in hte root cap daughter cells soon after division, and SMB in turn represses FEZ expression in these cells, thereby preventing further stem cell divisions.
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Identifiers

Type Value
AliasANAC033,Arabidopsis NAC domain containing protein 33,URP7,UAS-TAGGED ROOT PATTERNING7
full_nameSOMBRERO
symbolSMB
tidAT1G79580.3
UniProtQ9MA17

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IMP, IEA, UniProtregulation of transcription, DNA-templated1
GO:0048829 IMP, IEA, UniProtroot cap development1
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0007275 ISSGene Ontologymulticellular organism development1
GO:0010455 IMPUniProtpositive regulation of cell fate commitment1
GO:0009834 IMPUniProtplant-type secondary cell wall biogenesis1
GO:0003002 IMPUniProtregionalization1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAUniProtDNA binding1
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, ISM, UniProtnucleus1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR033518Protein SOMBRERO
IPR003441NAC domain

Mapman id Description
15.5.17.RNA biosynthesis.transcriptional regulation.transcription factor (NAC)
No SignalP domains detected for this gene.