Gene: AT1G71230 (Arabidopsis thaliana)

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Gene Identifier
AT1G71230
Transcript Identifier
AT1G71230.1
Gene Type
Coding gene
Location
Chr1 : 26852560-26854255 : positive

Family

Gene family
HOM04M004335
(42 genes in 29 species)
specific family
Subfamily
ORTHO04M006121
(38 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
COP9-signalosome 5B
Curated Summary
Encodes a subunit of the COP9 complex, similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Involved in protein deneddylation. Double mutants with CSN5A are constitutively photomorphogenic (de-etiolated) and have abnormal auxin responses.
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Identifiers

Type Value
AliasAJH2,CSN5
symbolCSN5B
tidAT1G71230.1
UniProtQ9FVU9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007275 IEAUniProtmulticellular organism development1
GO:0009585 IEAUniProtred, far-red light phototransduction1
GO:0009640 TASGene Ontologyphotomorphogenesis1
GO:0000338 IGI, IMP, UniProtprotein deneddylation1
GO:0009733 IGIUniProtresponse to auxin1
GO:0010100 IGIUniProtnegative regulation of photomorphogenesis1
GO:0010387 IMPUniProtCOP9 signalosome assembly1
GO:0010971 IMPUniProtpositive regulation of G2/M transition of mitotic cell cycle1
GO:0045732 IMPUniProtpositive regulation of protein catabolic process1
GO:2000082 IMPUniProtregulation of L-ascorbic acid biosynthetic process1
GO:0031347 IMPUniProtregulation of defense response
GO:0010093 IMPUniProtspecification of floral organ identity

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IPI, IEAGene Ontologyprotein binding1
GO:0008237 IEAUniProtmetallopeptidase activity1
GO:0046872 IEAUniProtmetal ion binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISMGene Ontologynucleus1
GO:0005737 IEAUniProtcytoplasm1
GO:0008180 IEA, IPI, TAS, UniProtCOP9 signalosome1 2 3

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000555JAB1/MPN/MOV34 metalloenzyme domain

Mapman id Description
19.2.3.3.1.5.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation of neddylated cullin.COP9 signalosome complex.component CSN5
No SignalP domains detected for this gene.