PLAZA 4.0 Monocots gene overview : AT1G69490

Gene: AT1G69490 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G69490
Transcript Identifier: AT1G69490.1
Gene Type: Coding gene
Location: Chr1 : 26122233-26123222 : positive

Family

Gene family: HOM04M000014
(2446 genes in 27 species)
specific family
Subfamily: ORTHO04M000140
(411 genes in 27 species)
specific family
Duplication type: Block duplicate

Descriptions

Description: NAC-like, activated by AP3/PI

Curated Summary: Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.

Identifiers

Type	Value
Alias	ANAC029,Arabidopsis NAC domain containing protein 29,ATNAP,NAC-LIKE, ACTIVATED BY AP3/PI
full_name	NAC-like, activated by AP3/PI
symbol	NAP
tid	AT1G69490.1
UniProt	O49255

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006355	IEA	Gene Ontology	regulation of transcription, DNA-templated	1
GO:0006351	IEA	UniProt	transcription, DNA-templated	1
GO:0007275	ISS	Gene Ontology	multicellular organism development	1
GO:0010150	IMP	UniProt	leaf senescence	1
GO:0009793	IMP	UniProt	embryo development ending in seed dormancy	1 2
GO:0009835	IMP	UniProt	fruit ripening	1 2
GO:0009825	IMP	UniProt	multidimensional cell growth	1
GO:0009908	IMP	UniProt	flower development	1
GO:0007015	IMP	UniProt	actin filament organization
GO:0045010	TAS	UniProt	actin nucleation
GO:0045893	IDA	UniProt	positive regulation of transcription, DNA-templated
GO:0010090	IMP	UniProt	trichome morphogenesis

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003677	IEA	UniProt	DNA binding	1
GO:0003700	ISS	UniProt	transcription factor activity, sequence-specific DNA binding	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IDA, ISM,	UniProt	nucleus	1 2
GO:0005789	IDA	UniProt	endoplasmic reticulum membrane
GO:0031209	TAS	UniProt	SCAR complex

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR003441	NAC domain

Mapman id	Description
15.5.17	.RNA biosynthesis.transcriptional regulation.transcription factor (NAC)

No SignalP domains detected for this gene.