PLAZA 4.0 Monocots gene overview : AT1G67500

Gene: AT1G67500 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G67500
Transcript Identifier: AT1G67500.3
Gene Type: Coding gene
Location: Chr1 : 25287707-25296714 : negative

Family

Gene family: HOM04M001277
(113 genes in 28 species)
specific family
Subfamily: ORTHO04M005462
(40 genes in 27 species)
specific family

Descriptions

Description: recovery protein 3

Curated Summary: Encodes the catalytic subunit of DNA polymerase zeta.Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).

Identifiers

Type	Value
Alias	ATREV3,recovery protein 3
symbol	REV3
tid	AT1G67500.3

Toolbox

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006260	IEA	UniProt	DNA replication	1
GO:0042276	IBA	UniProt	error-prone translesion synthesis	1
GO:0006281	IDA	UniProt	DNA repair	1
GO:0009411	IMP	UniProt	response to UV	1
GO:0010224	IMP	UniProt	response to UV-B	1
GO:0006974	IMP	UniProt	cellular response to DNA damage stimulus	1 2
GO:0071494	IMP	UniProt	cellular response to UV-C	1 2

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0000166	IEA	UniProt	nucleotide binding	1
GO:0003677	IEA, ISS,	UniProt	DNA binding	1 2
GO:0008408	IEA	UniProt	3'-5' exonuclease activity	1
GO:0003887	IEA, ISS,	UniProt	DNA-directed DNA polymerase activity	1 2
GO:0046872	IEA	UniProt	metal ion binding	1
GO:0051539	IEA	UniProt	4 iron, 4 sulfur cluster binding	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IBA, IEA, ISM,	UniProt	nucleus	1 2 3
GO:0016035	IBA, ISS,	UniProt	zeta DNA polymerase complex	1 2

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR023211	DNA polymerase, palm domain
IPR012337	Ribonuclease H-like domain
IPR025687	C4-type zinc-finger of DNA polymerase delta
IPR006134	DNA-directed DNA polymerase, family B, multifunctional domain
IPR006133	DNA-directed DNA polymerase, family B, exonuclease domain
IPR006172	DNA-directed DNA polymerase, family B
IPR017964	DNA-directed DNA polymerase, family B, conserved site

Mapman id	Description
14.2.6.1	.DNA damage response.DNA repair polymerase activities.DNA polymerase zeta heterodimer.catalytic subunit REV3

No SignalP domains detected for this gene.