Gene: AT1G65040 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G65040
Transcript Identifier
AT1G65040.2
Gene Type
Coding gene
Location
Chr1 : 24160105-24163365 : negative

Family

Gene family
HOM04M003209
(53 genes in 29 species)
specific family

Descriptions

Description
RING/U-box superfamily protein
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Identifiers

Type Value
AliasAtHrd1B,homolog of yeast Hrd1
full_namehomolog of yeast Hrd1
symbolHrd1B
tidAT1G65040.2
UniProtQ6NPT7

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000209 IBAGene Ontologyprotein polyubiquitination1
GO:0030968 IBAGene Ontologyendoplasmic reticulum unfolded protein response1
GO:0042787 IBAGene Ontologyprotein ubiquitination involved in ubiquitin-dependent protein catabolic process1
GO:0030433 IMPGene Ontologyubiquitin-dependent ERAD pathway1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270 IEA, ISSGene Ontologyzinc ion binding1 2
GO:0051082 IBAGene Ontologyunfolded protein binding1
GO:1904264 IBAGene Ontologyubiquitin protein ligase activity involved in ERAD pathway1
GO:1990381 IBAGene Ontologyubiquitin-specific protease binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000836 IBAGene OntologyHrd1p ubiquitin ligase complex1
GO:0016021 IEAUniProtintegral component of membrane1
GO:0036513 IBAGene OntologyDerlin-1 retrotranslocation complex1
GO:0044322 IBAGene Ontologyendoplasmic reticulum quality control compartment1
GO:0005886 IDAGene Ontologyplasma membrane1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
19.2.4.1.1.Protein homeostasis.ubiquitin-proteasome system.ER-associated protein degradation (ERAD).HRD1 E3 ubiquitin ligase complex.E3 ubiquitin ligase component HRD1
No SignalP domains detected for this gene.