Gene: AT1G61040 (Arabidopsis thaliana)

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Gene Identifier
AT1G61040
Transcript Identifier
AT1G61040.1
Gene Type
Coding gene
Location
Chr1 : 22483817-22485748 : positive

Family

Gene family
HOM04M003581
(48 genes in 28 species)
specific family

Descriptions

Description
plus-3 domain-containing protein
Curated Summary
Encodes a yeast Paf1C subunit homolog required for the expression of the MADS box gene FLC and other members of the FLC/MAF MADS-box gene family.
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Identifiers

Type Value
full_namevernalization independence 5
symbolVIP5
tidAT1G61040.1
UniProtQ9C950

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006368 IEAUniProttranscription elongation from RNA polymerase II promoter1
GO:0016570 IEAUniProthistone modification1
GO:0009908 IEAUniProtflower development1
GO:0009910 IMPUniProtnegative regulation of flower development1
GO:0045893 IMPUniProtpositive regulation of transcription, DNA-templated1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAUniProtDNA binding1
GO:0001076 IBAUniProttranscription factor activity, RNA polymerase II transcription factor binding1
GO:1990269 IBAUniProtRNA polymerase II C-terminal domain phosphoserine binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016593 IDA, IEA, UniProtCdc73/Paf1 complex1
GO:0005634 IDA, ISM, UniProtnucleus1 2

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR031102RNA polymerase-associated protein Rtf1
IPR004343Plus-3 domain

Mapman id Description
15.3.6.1.3.RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.PAF1C transcription initiation and elongation complex.component VIP5/RTF1
No SignalP domains detected for this gene.