Gene: AT1G56650 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G56650
Transcript Identifier
AT1G56650.1
Gene Type
Coding gene
Location
Chr1 : 21233714-21235089 : negative

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
production of anthocyanin pigment 1
Curated Summary
Encodes a putative MYB domain containing transcription factor involved in anthocyanin metabolism and radical scavenging. Essential for the sucrose-mediated expression of the dihydroflavonol reductase gene. Auxin and ethylene responsiveness of PAP1 transcription is lost in myb12 mutants.
Show more...

Identifiers

Type Value
AliasATMYB75,MYB DOMAIN PROTEIN 75,MYB75,MYELOBLASTOSIS PROTEIN 75,SIAA1,SUC-INDUCED ANTHOCYANIN ACCUMULATION 1
symbolPAP1
tidAT1G56650.1
UniProtQ9FE25

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter1
GO:0030154 IBAUniProtcell differentiation1
GO:0046283 IMPGene Ontologyanthocyanin-containing compound metabolic process1 AGRICOLA_IND:IND22298179
GO:0019430 IMPUniProtremoval of superoxide radicals1
GO:0009718 IMPUniProtanthocyanin-containing compound biosynthetic process1
GO:0009745 IMPUniProtsucrose mediated signaling1
GO:0009651 IEPUniProtresponse to salt stress1
GO:0009753 IEPUniProtresponse to jasmonic acid1
GO:0031540 IMPUniProtregulation of anthocyanin biosynthetic process1
GO:0009723 IEPUniProtresponse to ethylene1
GO:0009733 IEP, TAS, UniProtresponse to auxin1
GO:0009867 IMPUniProtjasmonic acid mediated signaling pathway1 2
GO:0031542 IMPUniProtpositive regulation of anthocyanin biosynthetic process1 2
GO:0050832 IEPUniProtdefense response to fungus1
GO:0006355 IEA, ISSUniProtregulation of transcription, DNA-templated1
GO:0009734 IEAUniProtauxin-activated signaling pathway
GO:0010205 IMPUniProtphotoinhibition
GO:0009737 IEPUniProtresponse to abscisic acid
GO:0009409 IEPUniProtresponse to cold
GO:0016036 IEPUniProtcellular response to phosphate starvation
GO:0009626 IEAUniProtplant-type hypersensitive response
GO:0010224 IEPUniProtresponse to UV-B
GO:0080167 IEAPLAZA Integrative Orthologyresponse to karrikinAT1G66390

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 ISS, IEAGene OntologyDNA binding1
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding1
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting1
GO:0043565 IBAUniProtsequence-specific DNA binding1
GO:0044212 IBAUniProttranscription regulatory region DNA binding1
GO:0003700 ISS, TAS, UniProttranscription factor activity, sequence-specific DNA binding1 2
GO:0005515 IPIGene Ontologyprotein binding1
GO:0003993 IEA, IMPUniProtacid phosphatase activity
GO:0046872 IEAUniProtmetal ion binding
GO:0008195 IDAUniProtphosphatidate phosphatase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576 IEA, ISM, UniProtextracellular region1
GO:0005634 IBA, IDA, IEA, ISM, UniProtnucleus1 2
GO:0005739 ISMGene Ontologymitochondrion1
GO:0009507 IDA, ISMUniProtchloroplast1
GO:0005886 IDAUniProtplasma membrane1
GO:0016021 IEAUniProtintegral component of membrane
GO:0009570 IDAUniProtchloroplast stroma
GO:0009534 IDAUniProtchloroplast thylakoid
GO:0009535 IDAUniProtchloroplast thylakoid membrane
GO:0010287 IDAUniProtplastoglobule
GO:0010319 IDAUniProtstromule
GO:0009579 IDAUniProtthylakoid
GO:0031977 IDAUniProtthylakoid lumen
GO:0005829 IDAUniProtcytosol
GO:0009505 IDAUniProtplant-type cell wall
GO:0005887 TASUniProtintegral component of plasma membrane

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.