Gene: AT1G55250 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G55250
Transcript Identifier
AT1G55250.5
Gene Type
Coding gene
Location
Chr1 : 20607214-20612302 : positive

Family

Gene family
HOM04M001554
(96 genes in 29 species)
specific family

Descriptions

Description
histone mono-ubiquitination 2
Curated Summary
Encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.
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Identifiers

Type Value
symbolHUB2
tidAT1G55250.5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010162 IMPUniProtseed dormancy process1
GO:0010390 IMPUniProthistone monoubiquitination1
GO:0009965 IMPUniProtleaf morphogenesis1
GO:0010228 IMPUniProtvegetative to reproductive phase transition of meristem1
GO:0033523 IMPUniProthistone H2B ubiquitination1
GO:0045087 IGIUniProtinnate immune response1 2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270 IEAGene Ontologyzinc ion binding1
GO:0016740 IEAUniProttransferase activity1
GO:0016874 IEAGene Ontologyligase activity1
GO:0042803 IPIUniProtprotein homodimerization activity1
GO:0046872 IEAUniProtmetal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, ISM, UniProtnucleus1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR017907Zinc finger, RING-type, conserved site

Mapman id Description
19.2.2.1.5.3.2.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase
No SignalP domains detected for this gene.