Gene: AT1G53840 (Arabidopsis thaliana)

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Gene Identifier
AT1G53840
Transcript Identifier
AT1G53840.1
Gene Type
Coding gene
Location
Chr1 : 20101533-20103458 : positive

Family

Gene family
HOM04M000051
(1378 genes in 27 species)
specific family
Subfamily
ORTHO04M000043
(822 genes in 27 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
pectin methylesterase 1
Curated Summary
encodes a pectin methylesterase
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Identifiers

Type Value
AliasATPME1,pectin methylesterase 1
symbolPME1
tidAT1G53840.1
UniProtQ43867

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0042545 IEAUniProtcell wall modification1
GO:0045490 IEAUniProtpectin catabolic process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030599 ISS, IBA, IEA, UniProtpectinesterase activity1 2
GO:0004857 IBA, IEAUniProtenzyme inhibitor activity
GO:0045330 IEAUniProtaspartyl esterase activity1
GO:0046910 IBAUniProtpectinesterase inhibitor activity1
GO:0005515 IPIGene Ontologyprotein binding1 2

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618 IEAUniProtcell wall1
GO:0000139 IEAUniProtGolgi membrane1
GO:0005576 ISS, ISMUniProtextracellular region1 2
GO:0005634 ISMGene Ontologynucleus1
GO:0009505 ISSGene Ontologyplant-type cell wall1
GO:0005774 IDAUniProtvacuolar membrane1
GO:0005886 IDAUniProtplasma membrane1
GO:0016020 IDAUniProtmembrane1
GO:0009506 IDAUniProtplasmodesma1
GO:0005768 IDAUniProtendosome1
GO:0005794 IDAUniProtGolgi apparatus1
GO:0005802 IDAUniProttrans-Golgi network1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012334Pectin lyase fold
IPR000070Pectinesterase, catalytic
IPR006501Pectinesterase inhibitor domain
IPR033131Pectinesterase, Asp active site
IPR018040Pectinesterase, Tyr active site
IPR011050Pectin lyase fold/virulence factor

Mapman id Description
21.3.1.2.1.Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase
No SignalP domains detected for this gene.