Gene: AT1G53690 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G53690
Transcript Identifier
AT1G53690.1
Gene Type
Coding gene
Location
Chr1 : 20042699-20043344 : negative

Family

Gene family
HOM04M003522
(48 genes in 27 species)
specific family

Descriptions

Description
DNA directed RNA polymerase, 7 kDa subunit
Curated Summary
Protein of unknown function that is homologous to At5g41010, which encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB12.
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Identifiers

Type Value
NoteDNA directed RNA polymerase, 7 kDa subunit
tidAT1G53690.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 ISS, IEAGene Ontologytranscription, DNA-templated1
GO:0009860 IEPGene Ontologypollen tube growth1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEA, ISSGene OntologyDNA binding1 2
GO:0003899 ISS, IEAGene OntologyDNA-directed 5'-3' RNA polymerase activity1
GO:0046872 IEAGene Ontologymetal ion binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISM, ISSGene Ontologynucleus1 2
GO:0000419 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase V complexAT5G41010
GO:0000418 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase IV complexAT5G41010
GO:0005665 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase II, core complexAT5G41010

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006591RNA polymerase archaeal subunit P/eukaryotic subunit RPABC4
IPR029040RNA polymerase subunit RPABC4/transcription elongation factor Spt4

Mapman id Description
15.1.6.10.RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 12
No SignalP domains detected for this gene.