Gene: AT1G52240 (Arabidopsis thaliana)

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Gene Identifier
AT1G52240
Transcript Identifier
AT1G52240.1
Gene Type
Coding gene
Location
Chr1 : 19455766-19457878 : negative

Family

Gene family
HOM04M000336
(323 genes in 27 species)
specific family
Subfamily
ORTHO04M001489
(94 genes in 23 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
rop guanine nucleotide exchange factor-like protein
Curated Summary
Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily .
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Identifiers

Type Value
AliasATROPGEF11,PIRF1,phytochrome interacting RopGEF 1
full_nameROP (rho of plants) guanine nucleotide exchange factor 11
symbolROPGEF11
tidAT1G52240.1
UniProtQ9M811

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007017 IEAGene Ontologymicrotubule-based process1
GO:0048364 IMPUniProtroot development1
GO:0080147 IMPUniProtroot hair cell development1
GO:0009860 IEAPLAZA Tree-based Orthologypollen tube growthAT4G38430
GO:0009793 IEAPLAZA Tree-based Orthologyembryo development ending in seed dormancyAT1G79860
GO:0048767 IEAPLAZA Tree-based Orthologyroot hair elongationAT2G45890
GO:0009664 IEAPLAZA Tree-based Orthologyplant-type cell wall organizationAT2G45890
GO:0080092 IEAPLAZA Tree-based Orthologyregulation of pollen tube growthAT4G38430

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005089 ISS, IEA, UniProtRho guanyl-nucleotide exchange factor activity1
GO:0042802 IEAPLAZA Tree-based Orthologyidentical protein bindingAT3G24620
GO:0005085 IEAPLAZA Tree-based Orthologyguanyl-nucleotide exchange factor activityAT3G24620
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT2G45890

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IDA, ISM, UniProtcytoplasm1 2
GO:0030286 IEAGene Ontologydynein complex1
GO:0005634 IDAUniProtnucleus1
GO:0009531 IEAPLAZA Tree-based Orthologysecondary cell wallAT2G45890
GO:0005886 IEAPLAZA Tree-based Orthologyplasma membraneAT2G45890
GO:0005829 IEAPLAZA Tree-based OrthologycytosolAT5G02010
GO:0016324 IEAPLAZA Tree-based Orthologyapical plasma membraneAT4G38430
GO:0090406 IEAPLAZA Tree-based Orthologypollen tubeAT1G79860

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005512PRONE domain

Mapman id Description
27.4.3.1.Multi-process regulation.Rop-GTPase regulatory system.RopGEF guanine nucleotide exchange factor activities.exchange factor (PRONE)
No SignalP domains detected for this gene.