Gene: AT1G52150 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G52150
Transcript Identifier
AT1G52150.3
Gene Type
Coding gene
Location
Chr1 : 19410118-19413961 : negative

Family

Gene family
HOM04M000677
(189 genes in 27 species)
specific family
Subfamily
ORTHO04M000847
(136 genes in 27 species)
specific family

Descriptions

Description
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curated Summary
Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.
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Identifiers

Type Value
symbolATHB-15
tidAT1G52150.3
UniProtF4IBA6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAGene Ontologytranscription, DNA-templated1
GO:0006355 IEA, ISSGene Ontologyregulation of transcription, DNA-templated1 2
GO:0030154 IEAGene Ontologycell differentiation1
GO:0009965 IMPGene Ontologyleaf morphogenesis1
GO:0009855 IMPGene Ontologydetermination of bilateral symmetry1
GO:0010014 IMPGene Ontologymeristem initiation1
GO:0010073 TASGene Ontologymeristem maintenance1
GO:0010075 IMPGene Ontologyregulation of meristem growth1
GO:1905392 IMPGene Ontologyplant organ morphogenesis1
GO:0010087 IMPGene Ontologyphloem or xylem histogenesis1
GO:0048263 IMPGene Ontologydetermination of dorsal identity1
GO:0080060 IGIGene Ontologyintegument development1
GO:0009880 IEAPLAZA Tree-based Orthologyembryonic pattern specificationAT1G30490
GO:0010051 IEAPLAZA Tree-based Orthologyxylem and phloem pattern formationAT5G60690
GO:0008284 IEAPLAZA Tree-based Orthologypositive regulation of cell proliferationAT4G32880
GO:0010072 IEAPLAZA Tree-based Orthologyprimary shoot apical meristem specificationAT4G32880
GO:0045597 IEAPLAZA Tree-based Orthologypositive regulation of cell differentiationAT4G32880
GO:0009956 IEAPLAZA Tree-based Orthologyradial pattern formationAT5G60690
GO:0009944 IEAPLAZA Tree-based Orthologypolarity specification of adaxial/abaxial axisAT2G34710
GO:0009955 IEAPLAZA Tree-based Orthologyadaxial/abaxial pattern specificationAT2G34710
GO:0009943 IEAPLAZA Tree-based Orthologyadaxial/abaxial axis specificationAT1G30490
GO:0009733 IEAPLAZA Tree-based Orthologyresponse to auxinAT4G32880
GO:0048364 IEAPLAZA Tree-based Orthologyroot developmentAT4G32880
GO:0010089 IEAPLAZA Tree-based Orthologyxylem developmentAT4G32880
GO:0010067 IEAPLAZA Tree-based Orthologyprocambium histogenesisAT4G32880

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEA, ISSGene OntologyDNA binding1 2
GO:0008289 IEAGene Ontologylipid binding1
GO:0003700 ISS, TASGene Ontologytranscription factor activity, sequence-specific DNA binding1 2
GO:0044212 IEAPLAZA Tree-based Orthologytranscription regulatory region DNA bindingAT5G60690
GO:0043565 IEAPLAZA Tree-based Orthologysequence-specific DNA bindingAT5G60690
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT1G30490

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, IEA, ISM, ISSGene Ontologynucleus1 2 3 4

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023393START-like domain
IPR001356Homeobox domain
IPR002913START domain
IPR013978MEKHLA
IPR009057Homeobox domain-like

Mapman id Description
15.5.3.2.RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP III)
No SignalP domains detected for this gene.