PLAZA 4.0 Monocots gene overview : AT1G34290

Gene: AT1G34290 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G34290
Transcript Identifier: AT1G34290.1
Gene Type: Coding gene
Location: Chr1 : 12498000-12498800 : positive

Family

Gene family: HOM04M000002
(4779 genes in 29 species)
specific family

Descriptions

Description: receptor like protein 5

Identifiers

Type	Value
Alias	AtRLP5,receptor like protein 5
symbol	RLP5
tid	AT1G34290.1
UniProt	Q9XID2

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008150	ND	Gene Ontology	biological_process	1
GO:0006468	IEA	PLAZA Homology (enrichment)	protein phosphorylation

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004672	IEA	PLAZA Homology (enrichment)	protein kinase activity
GO:0005524	IEA	PLAZA Homology (enrichment)	ATP binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016021	IEA	UniProt	integral component of membrane	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR032675	Leucine-rich repeat domain, L domain-like
IPR025875	Leucine rich repeat 4

Mapman id	Description
35.1	not assigned.annotated

No SignalP domains detected for this gene.