Gene: AT1G30490 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G30490
Transcript Identifier
AT1G30490.1
Gene Type
Coding gene
Location
Chr1 : 10796328-10800744 : negative

Family

Gene family
HOM04M000677
(189 genes in 27 species)
specific family
Subfamily
ORTHO04M000847
(136 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curated Summary
Dominant PHV mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Has overlapping functions with PHABULOSA, REVOLUTA and CORONA/ATHB15 in patterning the apical portion of the embryo. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain.
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Identifiers

Type Value
AliasATHB9
full_namePHAVOLUTA
symbolPHV
tidAT1G30490.1
UniProtO04292

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0006355 IEA, ISSGene Ontologyregulation of transcription, DNA-templated1 2
GO:0030154 IEAUniProtcell differentiation1
GO:0009943 IMPUniProtadaxial/abaxial axis specification1
GO:0009855 IMPUniProtdetermination of bilateral symmetry1
GO:0009944 IMPUniProtpolarity specification of adaxial/abaxial axis1
GO:0010014 IMPUniProtmeristem initiation1
GO:0010072 IMPUniProtprimary shoot apical meristem specification1
GO:0009880 IGIUniProtembryonic pattern specification1
GO:0080060 IGIUniProtintegument development1
GO:1905392 IEAPLAZA Tree-based Orthologyplant organ morphogenesisAT1G52150
GO:0010067 IEAPLAZA Tree-based Orthologyprocambium histogenesisAT4G32880
GO:0010089 IEAPLAZA Tree-based Orthologyxylem developmentAT4G32880
GO:0048263 IEAPLAZA Tree-based Orthologydetermination of dorsal identityAT1G52150
GO:0048364 IEAPLAZA Tree-based Orthologyroot developmentAT4G32880
GO:0009733 IEAPLAZA Tree-based Orthologyresponse to auxinAT4G32880
GO:0009965 IEAPLAZA Tree-based Orthologyleaf morphogenesisAT1G52150
GO:0009955 IEAPLAZA Integrative Orthologyadaxial/abaxial pattern specificationAT2G34710
GO:0009956 IEAPLAZA Tree-based Orthologyradial pattern formationAT5G60690
GO:0045597 IEAPLAZA Tree-based Orthologypositive regulation of cell differentiationAT4G32880
GO:0008284 IEAPLAZA Tree-based Orthologypositive regulation of cell proliferationAT4G32880
GO:0010051 IEAPLAZA Tree-based Orthologyxylem and phloem pattern formationAT5G60690
GO:0010073 IEAPLAZA Tree-based Orthologymeristem maintenanceAT1G52150
GO:0010087 IEAPLAZA Tree-based Orthologyphloem or xylem histogenesisAT1G52150
GO:0010075 IEAPLAZA Tree-based Orthologyregulation of meristem growthAT1G52150

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 ISS, IEA, UniProtDNA binding1
GO:0008289 IEAUniProtlipid binding1
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1
GO:0005515 IPIGene Ontologyprotein binding1
GO:0043565 IEAPLAZA Tree-based Orthologysequence-specific DNA bindingAT5G60690
GO:0044212 IEAPLAZA Tree-based Orthologytranscription regulatory region DNA bindingAT5G60690

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, ISS, UniProtnucleus1 2 3

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023393START-like domain
IPR013978MEKHLA
IPR001356Homeobox domain
IPR002913START domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.3.2.RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP III)
No SignalP domains detected for this gene.