Gene: AT1G28160 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G28160
Transcript Identifier
AT1G28160.1
Gene Type
Coding gene
Location
Chr1 : 9839387-9840124 : positive

Family

Gene family
HOM04M000008
(3579 genes in 29 species)
specific family
Subfamily
ORTHO04M000003
(3095 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
Integrase-type DNA-binding superfamily protein
Curated Summary
encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.
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Identifiers

Type Value
tidAT1G28160.1
UniProtQ9FZ90

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEA, ISSGene Ontologyregulation of transcription, DNA-templated1 2
GO:0006351 IEAGene Ontologytranscription, DNA-templated1
GO:0009873 TASGene Ontologyethylene-activated signaling pathway1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 ISS, TAS, IEAGene Ontologytranscription factor activity, sequence-specific DNA binding1 2
GO:0003677 IEA, ISSGene OntologyDNA binding1 2

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, ISSGene Ontologynucleus1 2 3
GO:0005622 TASGene Ontologyintracellular1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001471AP2/ERF domain
IPR017392AP2/ERF transcription factor ERF/PTI6
IPR016177DNA-binding domain

Mapman id Description
15.5.7.1.RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)
No SignalP domains detected for this gene.