Gene: AT1G25580 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G25580
Transcript Identifier
AT1G25580.1
Gene Type
Coding gene
Location
Chr1 : 8997064-8999600 : negative

Family

Gene family
HOM04M000519
(231 genes in 27 species)
specific family
Subfamily
ORTHO04M000427
(216 genes in 27 species)
specific family

Descriptions

Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Curated Summary
Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage.
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Identifiers

Type Value
AliasANAC008,Arabidopsis NAC domain containing protein 8
full_nameSUPPRESSOR OF GAMMA RADIATION 1
symbolSOG1
tidAT1G25580.1
UniProtQ6NQK2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAGene Ontologyregulation of transcription, DNA-templated1
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0007275 ISSGene Ontologymulticellular organism development1
GO:0000077 IMPUniProtDNA damage checkpoint1
GO:0040020 IMPUniProtregulation of meiotic nuclear division1
GO:0010332 IMPUniProtresponse to gamma radiation1
GO:2000652 IEAPLAZA Tree-based Orthologyregulation of secondary cell wall biogenesisAT4G28500
GO:0045893 IEAPLAZA Tree-based Orthologypositive regulation of transcription, DNA-templatedAT4G28500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1
GO:0043565 IPIUniProtsequence-specific DNA binding1 2
GO:0044212 IEAPLAZA Tree-based Orthologytranscription regulatory region DNA bindingAT4G29230

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, UniProtnucleus1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003441NAC domain

Mapman id Description
14.1.4.DNA damage response.DNA damage sensing and signalling.DNA damage response regulator (SOG1)
15.5.17.RNA biosynthesis.transcriptional regulation.transcription factor (NAC)
No SignalP domains detected for this gene.