Gene: AT1G25560 (Arabidopsis thaliana)

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Gene Identifier
AT1G25560
Transcript Identifier
AT1G25560.1
Gene Type
Coding gene
Location
Chr1 : 8981891-8982976 : negative

Family

Gene family
HOM04M000249
(390 genes in 27 species)
specific family
Subfamily
ORTHO04M000702
(157 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
AP2/B3 transcription factor family protein
Curated Summary
Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.
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Identifiers

Type Value
AliasAtTEM1,EDF1,ETHYLENE RESPONSE DNA BINDING FACTOR 1
full_nameTEMPRANILLO 1
symbolTEM1
tidAT1G25560.1
UniProtQ9C6M5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAGene Ontologyregulation of transcription, DNA-templated1
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0009873 IEA, NAS, UniProtethylene-activated signaling pathway1 2
GO:0048573 IMPUniProtphotoperiodism, flowering1
GO:0010358 IEAPLAZA Tree-based Orthologyleaf shapingAT5G06250
GO:0019760 IEAPLAZA Tree-based Orthologyglucosinolate metabolic processAT3G11580
GO:0048366 IEAPLAZA Tree-based Orthologyleaf developmentAT1G13260
GO:0009908 IEAPLAZA Tree-based Orthologyflower developmentAT2G46870
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT1G68840
GO:0048527 IEAPLAZA Tree-based Orthologylateral root developmentAT1G13260
GO:0009910 IEAPLAZA Tree-based Orthologynegative regulation of flower developmentAT1G13260
GO:0009741 IEAPLAZA Tree-based Orthologyresponse to brassinosteroidAT1G13260
GO:0080113 IEAPLAZA Tree-based Orthologyregulation of seed growthAT3G11580
GO:0080167 IEAPLAZA Tree-based Orthologyresponse to karrikinAT2G36080
GO:0010073 IEAPLAZA Tree-based Orthologymeristem maintenanceAT5G06250
GO:1901371 IEAPLAZA Tree-based Orthologyregulation of leaf morphogenesisAT2G46870

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEA, NAS, UniProtDNA binding1 2
GO:0003700 ISS, IEA, UniProttranscription factor activity, sequence-specific DNA binding1
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT1G68840
GO:0044212 IEAPLAZA Tree-based Orthologytranscription regulatory region DNA bindingAT3G25730

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, UniProtnucleus1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003340B3 DNA binding domain
IPR001471AP2/ERF domain
IPR015300DNA-binding pseudobarrel domain
IPR016177DNA-binding domain

Mapman id Description
15.5.5.3.RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (RAV/NGATHA)
15.5.7.5.RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2-RAV)
No SignalP domains detected for this gene.