Gene: AT1G25340 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G25340
Transcript Identifier
AT1G25340.3
Gene Type
Coding gene
Location
Chr1 : 8885210-8886629 : positive

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
myb domain protein 116
Curated Summary
putative transcription factor (MYB116)
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Identifiers

Type Value
AliasAtMYB116,myb domain protein 116
symbolMYB116
tidAT1G25340.3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter1
GO:0030154 IBAUniProtcell differentiation1
GO:0006355 TASUniProtregulation of transcription, DNA-templated1
GO:0010015 IEAPLAZA Integrative Orthologyroot morphogenesisAT1G68320
GO:0016036 IEAPLAZA Integrative Orthologycellular response to phosphate starvationAT1G68320
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT1G68320
GO:0009686 IEAPLAZA Integrative Orthologygibberellin biosynthetic processAT1G68320
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT1G68320
GO:0010373 IEAPLAZA Integrative Orthologynegative regulation of gibberellin biosynthetic processAT1G68320
GO:0055062 IEAPLAZA Integrative Orthologyphosphate ion homeostasisAT1G68320

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEA, ISS, UniProtDNA binding1 2
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding1
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting1
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1
GO:0043565 IBAUniProtsequence-specific DNA binding1
GO:0044212 IBAUniProttranscription regulatory region DNA binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBA, ISM, UniProtnucleus1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.