Gene: AT1G09700 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G09700
Transcript Identifier
AT1G09700.1
Gene Type
Coding gene
Location
Chr1 : 3137960-3140118 : negative

Family

Gene family
HOM04M000527
(227 genes in 27 species)
specific family
Subfamily
ORTHO04M004002
(49 genes in 26 species)
specific family

Descriptions

Description
dsRNA-binding domain-like superfamily protein
Curated Summary
Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.
Show more...

Identifiers

Type Value
AliasAtDRB1,DRB1,DSRNA-BINDING PROTEIN 1
full_nameHYPONASTIC LEAVES 1
symbolHYL1
tidAT1G09700.1
UniProtO04492

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009733 IMPUniProtresponse to auxin1
GO:0009735 IMPUniProtresponse to cytokinin1
GO:0009737 IMPUniProtresponse to abscisic acid1
GO:0035196 IMPUniProtproduction of miRNAs involved in gene silencing by miRNA1
GO:0035279 IMPUniProtmRNA cleavage involved in gene silencing by miRNA1
GO:0031054 IMPUniProtpre-miRNA processing1
GO:0010267 IMPUniProtproduction of ta-siRNAs involved in RNA interference1
GO:0010305 IMPUniProtleaf vascular tissue pattern formation1
GO:0010589 IMPUniProtleaf proximal/distal pattern formation1
GO:0031053 IBAUniProtprimary miRNA processing
GO:0090502 IBAUniProtRNA phosphodiester bond hydrolysis, endonucleolytic

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003725 IDA, IEA, UniProtdouble-stranded RNA binding1
GO:0005515 IPIGene Ontologyprotein binding1
GO:0035198 IDAUniProtmiRNA binding1
GO:0004525 IBAUniProtribonuclease III activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 ISMGene Ontologycytoplasm1
GO:0016607 IEAUniProtnuclear speck1
GO:0005634 IDAUniProtnucleus1
GO:0015030 IDAGene OntologyCajal body1
GO:0010445 IDAUniProtnuclear dicing body1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR031147Double-stranded RNA-binding protein
IPR014720Double-stranded RNA-binding domain

Mapman id Description
16.10.2.1.2.RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.component HYL1
No SignalP domains detected for this gene.