PLAZA 4.0 Monocots gene overview : AT1G09540

Gene: AT1G09540 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G09540
Transcript Identifier: AT1G09540.1
Gene Type: Coding gene
Location: Chr1 : 3086333-3087689 : positive

Family

Gene family: HOM04M000010
(3187 genes in 28 species)
specific family

Descriptions

Description: myb domain protein 61

Curated Summary: Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size.

Identifiers

Type	Value
Alias	ATMYB61,ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 61
symbol	MYB61
tid	AT1G09540.1
UniProt	Q8VZQ2

Toolbox

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006355	ISS	Gene Ontology	regulation of transcription, DNA-templated	1
GO:0006357	IBA	UniProt	regulation of transcription from RNA polymerase II promoter	1
GO:0030154	IBA	UniProt	cell differentiation	1
GO:0010214	IMP	UniProt	seed coat development	1
GO:0010119	IMP	UniProt	regulation of stomatal movement	1
GO:0009733	IEP	UniProt	response to auxin	1
GO:0001944	IMP	UniProt	vasculature development	1
GO:0010089	IMP	UniProt	xylem development	1
GO:0048364	IMP	UniProt	root development	1
GO:0006351	IEA	UniProt	transcription, DNA-templated
GO:0009751	IEA	PLAZA Integrative Orthology	response to salicylic acid	AT1G57560
GO:0009753	IEA	PLAZA Integrative Orthology	response to jasmonic acid	AT1G57560
GO:0009739	IEA	PLAZA Integrative Orthology	response to gibberellin	AT1G57560

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003677	ISS, IEA	Gene Ontology	DNA binding	1
GO:0000981	IBA	UniProt	RNA polymerase II transcription factor activity, sequence-specific DNA binding	1
GO:0001135	IBA	UniProt	transcription factor activity, RNA polymerase II transcription factor recruiting	1
GO:0043565	IBA	UniProt	sequence-specific DNA binding	1
GO:0044212	IBA	UniProt	transcription regulatory region DNA binding	1
GO:0003700	IDA, ISS,	UniProt	transcription factor activity, sequence-specific DNA binding	1 2

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IBA, ISM,	UniProt	nucleus	1 2

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox domain-like

Mapman id	Description
15.5.2.1	.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)

No SignalP domains detected for this gene.