Gene: AT1G05880 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G05880
Transcript Identifier
AT1G05880.2
Gene Type
Coding gene
Location
Chr1 : 1775655-1778330 : positive

Family

Gene family
HOM04M000513
(233 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
RING/U-box superfamily protein
Curated Summary
Encodes ARI12 (ARIADNE 12). ARI12 belongs to a family of ‘RING between RING fingers' (RBR) domain proteins with E3 ligase activity. Expression of ARI12 is induced by UV-B exposure.
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Identifiers

Type Value
AliasATARI12,ARABIDOPSIS ARIADNE 12
full_nameARIADNE 12
symbolARI12
tidAT1G05880.2
UniProtQ84RQ9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567 IEAInterProprotein ubiquitination
GO:0000209 IBAUniProtprotein polyubiquitination1
GO:0032436 IBAUniProtpositive regulation of proteasomal ubiquitin-dependent protein catabolic process1
GO:0042787 IBAUniProtprotein ubiquitination involved in ubiquitin-dependent protein catabolic process1
GO:0071456 IEPUniProtcellular response to hypoxia1
GO:0010224 IEPUniProtresponse to UV-B1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842 IEAUniProtubiquitin-protein transferase activity
GO:0003676 IEAInterPronucleic acid binding
GO:0008270 IEAInterProzinc ion binding
GO:0031624 IBAUniProtubiquitin conjugating enzyme binding1
GO:0046872 IEAUniProtmetal ion binding1
GO:0061630 IBAUniProtubiquitin protein ligase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000151 IBAUniProtubiquitin ligase complex1
GO:0005634 ISMGene Ontologynucleus1
GO:0005737 IBAUniProtcytoplasm1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR031127E3 ubiquitin ligase RBR family
IPR002867IBR domain
IPR001878Zinc finger, CCHC-type
IPR001841Zinc finger, RING-type

Mapman id Description
19.2.2.1.5.4.1.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (RBR-Ariadne)
No SignalP domains detected for this gene.