Gene: AT1G05310 (Arabidopsis thaliana)

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Gene Identifier
AT1G05310
Transcript Identifier
AT1G05310.1
Gene Type
Coding gene
Location
Chr1 : 1550615-1552434 : negative

Family

Gene family
HOM04M000051
(1378 genes in 27 species)
specific family
Subfamily
ORTHO04M000205
(327 genes in 27 species)
specific family

Descriptions

Description
Pectin lyase-like superfamily protein
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Identifiers

Type Value
tidAT1G05310.1
UniProtO23038

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0042545 IEAGene Ontologycell wall modification1
GO:0045490 IEAGene Ontologypectin catabolic process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030599 IEA, ISSGene Ontologypectinesterase activity1 2
GO:0045330 IEAGene Ontologyaspartyl esterase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618 IEAGene Ontologycell wall1
GO:0005576 IEA, ISMGene Ontologyextracellular region1 2
GO:0009505 ISSGene Ontologyplant-type cell wall1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012334Pectin lyase fold
IPR000070Pectinesterase, catalytic
IPR033131Pectinesterase, Asp active site
IPR011050Pectin lyase fold/virulence factor

Mapman id Description
21.3.1.2.1.Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase
No SignalP domains detected for this gene.